Hua X, Ungaro RC, Petrick LM, Chan AT, Porter CK, Khalili H; Nurses’ Health Study; PREDICTS Collaborators. Inflammatory Bowel Disease Is Associated With Prediagnostic Perturbances in Metabolic Pathways. Gastroenterology. 2023 Jan;164(1):147-150.e2.

Lopes EW, Chan SSM, Song M, Ludvigsson JF, Håkansson N, Lochhead P, Clark A, Burke KE, Ananthakrishnan AN, Cross AJ, Palli D, Bergmann MM, Richter JM, Chan AT, Olén O, Wolk A, Khalili H; EPIC-IBD investigators. Lifestyle factors for the prevention of inflammatory bowel disease. Gut. 2022 Dec 6:gutjnl-2022-328174. 

Hua X, Cao Y, Morgan DM, Miller K, Chin SM, Bellavance D, Khalili H. Longitudinal analysis of the impact of oral contraceptive use on the gut microbiome. J Med Microbiol. 2022 Apr;71(4).

Lopes EW, Lochhead P, Burke KE, Richter JM, Ananthakrishnan AN, Chan AT, Khalili H. Risk Factors for Incident Inflammatory Bowel Disease According to Disease Phenotype. Clin Gastroenterol Hepatol. 2022 Jan 12:S1542-3565(22)00026-X.

Kamboj AK, McGoldrick J, Voth E, Penrice D, Tome J, Gujral A, Miller K, Burke KE, Pardi DS, Khalili H. Clinical Characteristics and Treatment Response in Microscopic Colitis Based on Age at Diagnosis: A Multicenter Retrospective Study. Dig Dis Sci. 2021 Jul 20.

Chan SSM, Chen Y, Casey K, Olen O, Ludvigsson JF, Carbonnel F, Oldenburg B, Gunter MJ, Tjønneland A, Grip O; DEFINe-IBD Investigators, Lochhead P, Chan AT, Wolk A, Khalili H. Obesity is Associated With Increased Risk of Crohn's disease, but not Ulcerative Colitis: A Pooled Analysis of Five Prospective Cohort Studies. Clin Gastroenterol Hepatol. 2021 Jul 7:S1542-3565(21)00720-5. 

Lopes EW, Lebwohl B, Burke KE, Ivey KL, Ananthakrishnan AN, Lochhead P, Richter JM, Ludvigsson JF, Willett WC, Chan AT, Khalili H. Dietary Gluten Intake is not Associated with Risk of Inflammatory Bowel Disease in U.S. Adults without Celiac Disease. Clin Gastroenterol Hepatol. 2021 Mar 25:S1542-3565(21)00339-6. 

Khalili H, Axelrad JE, Roelstraete B, Olén O, D'Amato M, Ludvigsson JF. Gastrointestinal Infection and Risk of Microscopic Colitis: A Nationwide Case-Control Study in Sweden Gastroenterology. 2021 Jan 6:S0016-5085(21)00027-5.

Khalili H, Håkansson N, Chan SS, Chen Y, Lochhead P, Ludvigsson JF, Chan AT, Hart AR, Olén O, Wolk A. Adherence to a Mediterranean diet is associated with a lower risk of later-onset Crohn's disease: results from two large prospective cohort studies. Gut. 2020 Sep;69(9):1637-1644.

Morgan DM, Cao Y, Miller K, McGoldrick J, Bellavance D, Chin SM, Halvorsen S, Maxner B, Richter JM, Sassi S, Burke KE, Yarze JC, Ludvigsson JF, Staller K, Chung DC, Khalili H. Microscopic Colitis is Characterized by Intestinal Dysbiosis. Clin Gastroenterol Hepatol. 2020 Apr;18(4):984-986.